Natural selection and infectious disease in human populations by Karlsson, Elinor K., Kwiatkowski, Dominic P., Sabeti, Pardis C.

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FRESCo: finding regions of excess synonymous constraint in diverse viruses by Sealfon, Rachel S, Lin, Michael F, Jungreis, Irwin, Wolf, Maxim Y, Kellis, Manolis, Sabeti, Pardis C

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Strand-specific RNA sequencing in Plasmodium falciparum malaria identifies developmentally regulated long non-coding RNA and circular RNA by Broadbent, Kate M, Broadbent, Jill C, Ribacke, Ulf, Wirth, Dyann, Rinn, John L, Sabeti, Pardis C

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Evaluation of the Potential Impact of Ebola Virus Genomic Drift on the Efficacy of Sequence-Based Candidate Therapeutics by Kugelman, Jeffrey R., Sanchez-Lockhart, Mariano, Andersen, Kristian G., Gire, Stephen, Park, Daniel J., Sealfon, Rachel, Lin, Aaron E., Wohl, Shirlee, Sabeti, Pardis C., Kuhn, Jens H., Palacios, Gustavo F.

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COIL: a methodology for evaluating malarial complexity of infection using likelihood from single nucleotide polymorphism data by Galinsky, Kevin, Valim, Clarissa, Salmier, Arielle, de Thoisy, Benoit, Musset, Lise, Legrand, Eric, Faust, Aubrey, Baniecki, Mary Lynn, Ndiaye, Daouda, Daniels, Rachel F, Hartl, Daniel L, Sabeti, Pardis C, Wirth, Dyann F, Volkman, Sarah K, Neafsey, Daniel E

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Development of a Single Nucleotide Polymorphism Barcode to Genotype Plasmodium vivax Infections by Baniecki, Mary Lynn, Faust, Aubrey L., Schaffner, Stephen F., Park, Daniel J., Galinsky, Kevin, Daniels, Rachel F., Hamilton, Elizabeth, Ferreira, Marcelo U., Karunaweera, Nadira D., Serre, David, Zimmerman, Peter A., Sá, Juliana M., Wellems, Thomas E., Musset, Lise, Legrand, Eric, Melnikov, Alexandre, Neafsey, Daniel E., Volkman, Sarah K., Wirth, Dyann F., Sabeti, Pardis C.

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Monitoring of Ebola Virus Makona Evolution through Establishment of Advanced Genomic Capability in Liberia by Kugelman, Jeffrey R., Wiley, Michael R., Mate, Suzanne, Ladner, Jason T., Beitzel, Brett, Fakoli, Lawrence, Taweh, Fahn, Prieto, Karla, Diclaro, Joseph W., Minogue, Timothy, Schoepp, Randal J., Schaecher, Kurt E., Pettitt, James, Bateman, Stacey, Fair, Joseph, Kuhn, Jens H., Hensley, Lisa, Park, Daniel J., Sabeti, Pardis C., Sanchez-Lockhart, Mariano, Bolay, Fatorma K., Palacios, Gustavo

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Discovery of Novel Rhabdoviruses in the Blood of Healthy Individuals from West Africa by Stremlau, Matthew H., Andersen, Kristian G., Folarin, Onikepe A., Grove, Jessica N., Odia, Ikponmwonsa, Ehiane, Philomena E., Omoniwa, Omowunmi, Omoregie, Omigie, Jiang, Pan-Pan, Yozwiak, Nathan L., Matranga, Christian B., Yang, Xiao, Gire, Stephen K., Winnicki, Sarah, Tariyal, Ridhi, Schaffner, Stephen F., Okokhere, Peter O., Okogbenin, Sylvanus, Akpede, George O., Asogun, Danny A., Agbonlahor, Dennis E., Walker, Peter J., Tesh, Robert B., Levin, Joshua Z., Garry, Robert F., Sabeti, Pardis C., Happi, Christian T.

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Most neutralizing human monoclonal antibodies target novel epitopes requiring both Lassa virus glycoprotein subunits by Robinson, James E., Hastie, Kathryn M., Cross, Robert W., Yenni, Rachael E., Elliott, Deborah H., Rouelle, Julie A., Kannadka, Chandrika B., Smira, Ashley A., Garry, Courtney E., Bradley, Benjamin T., Yu, Haini, Shaffer, Jeffrey G., Boisen, Matt L., Hartnett, Jessica N., Zandonatti, Michelle A., Rowland, Megan M., Heinrich, Megan L., Martínez-Sobrido, Luis, Cheng, Benson, de la Torre, Juan C., Andersen, Kristian G., Goba, Augustine, Momoh, Mambu, Fullah, Mohamed, Gbakie, Michael, Kanneh, Lansana, Koroma, Veronica J., Fonnie, Richard, Jalloh, Simbirie C., Kargbo, Brima, Vandi, Mohamed A., Gbetuwa, Momoh, Ikponmwosa, Odia, Asogun, Danny A., Okokhere, Peter O., Follarin, Onikepe A., Schieffelin, John S., Pitts, Kelly R., Geisbert, Joan B., Kulakoski, Peter C., Wilson, Russell B., Happi, Christian T., Sabeti, Pardis C., Gevao, Sahr M., Khan, S. Humarr, Grant, Donald S., Geisbert, Thomas W., Saphire, Erica Ollmann, Branco, Luis M., Garry, Robert F.

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Ebola Virus Epidemiology, Transmission, and Evolution during Seven Months in Sierra Leone by Park, Daniel J., Dudas, Gytis, Wohl, Shirlee, Goba, Augustine, Whitmer, Shannon L.M., Andersen, Kristian G., Sealfon, Rachel S., Ladner, Jason T., Kugelman, Jeffrey R., Matranga, Christian B., Winnicki, Sarah M., Qu, James, Gire, Stephen K., Gladden-Young, Adrianne, Jalloh, Simbirie, Nosamiefan, Dolo, Yozwiak, Nathan L., Moses, Lina M., Jiang, Pan-Pan, Lin, Aaron E., Schaffner, Stephen F., Bird, Brian, Towner, Jonathan, Mamoh, Mambu, Gbakie, Michael, Kanneh, Lansana, Kargbo, David, Massally, James L.B., Kamara, Fatima K., Konuwa, Edwin, Sellu, Josephine, Jalloh, Abdul A., Mustapha, Ibrahim, Foday, Momoh, Yillah, Mohamed, Erickson, Bobbie R., Sealy, Tara, Blau, Dianna, Paddock, Christopher, Brault, Aaron, Amman, Brian, Basile, Jane, Bearden, Scott, Belser, Jessica, Bergeron, Eric, Campbell, Shelley, Chakrabarti, Ayan, Dodd, Kimberly, Flint, Mike, Gibbons, Aridth, Goodman, Christin, Klena, John, McMullan, Laura, Morgan, Laura, Russell, Brandy, Salzer, Johanna, Sanchez, Angela, Wang, David, Jungreis, Irwin, Tomkins-Tinch, Christopher, Kislyuk, Andrey, Lin, Michael F., Chapman, Sinead, MacInnis, Bronwyn, Matthews, Ashley, Bochicchio, James, Hensley, Lisa E., Kuhn, Jens H., Nusbaum, Chad, Schieffelin, John S., Birren, Bruce W., Forget, Marc, Nichol, Stuart T., Palacios, Gustavo F., Ndiaye, Daouda, Happi, Christian, Gevao, Sahr M., Vandi, Mohamed A., Kargbo, Brima, Holmes, Edward C., Bedford, Trevor, Gnirke, Andreas, Ströher, Ute, Rambaut, Andrew, Garry, Robert F., Sabeti, Pardis C.

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