STITCH 5: augmenting protein–chemical interaction networks with tissue and affinity data by Szklarczyk, Damian, Santos, Alberto, von Mering, Christian, Jensen, Lars Juhl, Bork, Peer, Kuhn, Michael

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WeGET: predicting new genes for molecular systems by weighted co-expression by Szklarczyk, Radek, Megchelenbrink, Wout, Cizek, Pavel, Ledent, Marie, Velemans, Gonny, Szklarczyk, Damian, Huynen, Martijn A.

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eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences by Huerta-Cepas, Jaime, Szklarczyk, Damian, Forslund, Kristoffer, Cook, Helen, Heller, Davide, Walter, Mathias C., Rattei, Thomas, Mende, Daniel R., Sunagawa, Shinichi, Kuhn, Michael, Jensen, Lars Juhl, von Mering, Christian, Bork, Peer

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STRING v10: protein–protein interaction networks, integrated over the tree of life by Szklarczyk, Damian, Franceschini, Andrea, Wyder, Stefan, Forslund, Kristoffer, Heller, Davide, Huerta-Cepas, Jaime, Simonovic, Milan, Roth, Alexander, Santos, Alberto, Tsafou, Kalliopi P., Kuhn, Michael, Bork, Peer, Jensen, Lars J., von Mering, Christian

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Standardized benchmarking in the quest for orthologs by Altenhoff, Adrian M, Boeckmann, Brigitte, Capella-Gutierrez, Salvador, Dalquen, Daniel A, DeLuca, Todd, Forslund, Kristoffer, Huerta-Cepas, Jaime, Linard, Benjamin, Pereira, Cécile, Pryszcz, Leszek P, Schreiber, Fabian, da Silva, Alan Sousa, Szklarczyk, Damian, Train, Clément-Marie, Bork, Peer, Lecompte, Odile, von Mering, Christian, Xenarios, Ioannis, Sjölander, Kimmen, Jensen, Lars Juhl, Martin, Maria J, Muffato, Matthieu, Gabaldón, Toni, Lewis, Suzanna E, Thomas, Paul D, Sonnhammer, Erik, Dessimoz, Christophe

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